BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005D02LP1|AL425362
(991 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1560 1842 0.0
3x_Contig1790 188 2e-47
3x_Contig1585 180 4e-45
3x_Contig1806 138 2e-32
3x_Contig1804 134 3e-31
3x_Contig1802 118 2e-26
3x_Contig1670 108 2e-23
3x_Contig1547 102 1e-21
3x_Contig924 102 1e-21
>3x_Contig1560
Length = 9209
Score = 1842 bits (920), Expect = 0.0
Identities = 960/982 (97%), Gaps = 1/982 (0%)
Strand = Plus / Minus
Query: 1 ttacactcaagtattccccatccttttaatatactatgttttacttcttgttgtcatcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2798 ttacactcaagtattccccatccttttaatatactatgttttacttcttgttgtcatcaa 2739
Query: 61 ccaaaaatgtcttttctttttttggattaactttattttcgaaactgactttttacttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2738 ccaaaaatgtcttttctttttttggattaactttattttcgaaactgactttttacttta 2679
Query: 121 agaaaattgtcagttttccgcactgaacttgcttgggcgcatacaaaaccaaatgaaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2678 agaaaattgtcagttttccgcactgaacttgcttgggcgcatacaaaaccaaatgaaaat 2619
Query: 181 gaactcttctgtaggcgaagaaaacgctttaatatatatacmaacacaccgaattgaatt 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2618 gaactcttctgtaggcgaagaaaacgctttaatatatatacaaacacaccgaattgaatt 2559
Query: 241 cgtttgtttcttttcttgtagatacaacgagatgtttggggaaataactaagtaccttaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2558 cgtttgtttcttttcttgtagatacaacgagatgtttggggaaataactaagtaccttaa 2499
Query: 301 tgaagagaaaaatattcagttaaataaacaacgtttggtgttgtacgcatattcctaagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2498 tgaagagaaaaatattcagttaaataaacaacgtttggtgttgtacgcatattcctaagg 2439
Query: 361 cgacagtcattgccaaatattaggctgaagttcgatgaactaggatcaaggctacagcgt 420
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2438 cgacagttattgccaaatattaggctgaagttcgatgaactaggatcaaggctacagcgt 2379
Query: 421 ttgatgattggmagcccaatctaaaaagtatatmagtmgaaggtttcttcatcctatctt 480
||||||||||| ||||||||||||||||||||| | | ||||||||||||||||||||||
Sbjct: 2378 ttgatgattggaagcccaatctaaaaagtatataactagaaggtttcttcatcctatctt 2319
Query: 481 cccctcyggatttgacgacatactaattattgttctacattaagtyatatgtcagatgtm 540
|||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 2318 cccctctggatttgacgacatactaatatttgttctacattaagttatatgtcagatgta 2259
Query: 541 agacaccaaggagaacaccgtaagtcattyacttaattagtcgaagtttgtatgccgagc 600
||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 2258 agaaaccaaggagaacaccgtaagtaatttacttaattagtcgaagtttgtatgccgagc 2199
Query: 601 accaatttaactatccaattatttcaagatttatyatatttmtcaatmaatmaatytmaa 660
|||||||||||||||||||||||||||||||||| |||||| ||||| ||| ||| | ||
Sbjct: 2198 accaatttaactatccaattatttcaagatttattatatttatcaataaataaatttaaa 2139
Query: 661 atatgttctaatacatatttattaataatatgtttttgactttaacaactacaaatcaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2138 atatgttctaatacatatttattaataatatgtttttgactttaacaactacaaatcaga 2079
Query: 721 atggcatccagttacatcaatactactaacgctctatgccaagcccctactaccaaacat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2078 atggcatccagttacatcaatactactaacgctctatgccaagcccctactaccaaacat 2019
Query: 781 gatgaatatccagtccaacaaaactgattattgctttatggtaatatgaaggttaaacag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2018 gatgaatatccagtccaacaaaactgattattgctttatggtaatatgaaggttaaacag 1959
Query: 841 tagaaccaaggagaacatcgtaaatgatgtccttgataaattaaagttcgtatactaatc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1958 tagaaccaaggagaacatcgtaaatgatgtccttgataaattaaagttcgtatactaatc 1899
Query: 901 atcaaagccaacatccaaaatacctcattgttggccacg-artcagagtgacatttattg 959
||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 1898 atcaaagccaacatccaaaatacctcattgttggccacgaagtcagagtgacatttattg 1839
Query: 960 gcatgtattgatatgttagatt 981
||||||||||||||||||||||
Sbjct: 1838 gcatgtattgatatgttagatt 1817
Score = 114 bits (57), Expect = 3e-25
Identities = 63/65 (96%)
Strand = Plus / Minus
Query: 736 atcaatactactaacgctctatgccaagcccctactaccaaacatgatgaatatccagtc 795
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 9150 atcaatactactaaccctctatgccaaacccctactaccaaacatgatgaatatccagtc 9091
Query: 796 caaca 800
|||||
Sbjct: 9090 caaca 9086
>3x_Contig1790
Length = 27369
Score = 188 bits (94), Expect = 2e-47
Identities = 156/180 (86%), Gaps = 1/180 (0%)
Strand = Plus / Plus
Query: 405 atcaaggctacagcgtttgatgattggmagcccaatctaaaaagtatatmagtmgaaggt 464
||||||||||||| ||||| |||||| |||||||||| |||||||||| ||| || |||
Sbjct: 5003 atcaaggctacagtgtttggtgattgaaagcccaatctgaaaagtatataagtagatggt 5062
Query: 465 ttcttcatcctatcttcccctcyggatttgacgacatactaattattgttctacattaag 524
|||||||||| || || || || |||||||| |||||| ||||||||||||||||||||
Sbjct: 5063 ttcttcatccaatttttccatctggatttgatgacatattaattattgttctacattaac 5122
Query: 525 tyatatgtcagatgtmagacaccaaggagaacaccgtaagtcattyacttaattagtcga 584
| |||||||||||| ||| | |||||||| |||||||||| ||| ||||||||||||||
Sbjct: 5123 ttgtatgtcagatgtaaga-aacaaggagagcaccgtaagtaatttacttaattagtcga 5181
Score = 136 bits (68), Expect = 7e-32
Identities = 92/100 (92%)
Strand = Plus / Plus
Query: 702 ttaacaactacaaatcagaatggcatccagttacatcaatactactaacgctctatgcca 761
||||||||||||| ||||||||||||| | ||||| ||||||||||||| ||||| ||||
Sbjct: 5209 ttaacaactacaagtcagaatggcatctatttacaccaatactactaaccctctaggcca 5268
Query: 762 agcccctactaccaaacatgatgaatatccagtccaacaa 801
|| ||||||||||||||||||||||||||||| |||||||
Sbjct: 5269 agtccctactaccaaacatgatgaatatccagcccaacaa 5308
>3x_Contig1585
Length = 11490
Score = 180 bits (90), Expect = 4e-45
Identities = 186/221 (84%), Gaps = 2/221 (0%)
Strand = Plus / Plus
Query: 397 gaactaggatcaaggctacagcgtttgatgattggmagcccaatctaaaaagtatatmag 456
||||||||||||||||||||| ||||| || |||| | |||||||||||||||||| ||
Sbjct: 1456 gaactaggatcaaggctacagagtttggtgcttggaaaaccaatctaaaaagtatataag 1515
Query: 457 tmgaaggtttcttcatcctatcttcccctcyggatttgacgacatactaattattgttct 516
| |||||||||||||||| || ||||| || ||||| | ||| | |||||||||||||
Sbjct: 1516 tagaaggtttcttcatccaattttcccatctggattcggttacacattaattattgttct 1575
Query: 517 acattaagtyatatgtcagatgtmagacaccaaggagaacaccgtaagtcattyacttaa 576
||||||| | |||||||||| ||| || |||||||||||||||||| ||| ||||||
Sbjct: 1576 acattaact--tatgtcagatagaagaaactaaggagaacaccgtaagtaatttacttaa 1633
Query: 577 ttagtcgaagtttgtatgccgagcaccaatttaactatcca 617
| | |||||||| |||| || | ||||||||||| ||||||
Sbjct: 1634 tcaatcgaagttagtatacccatcaccaatttaattatcca 1674
>3x_Contig1806
Length = 53694
Score = 138 bits (69), Expect = 2e-32
Identities = 186/229 (81%), Gaps = 3/229 (1%)
Strand = Plus / Minus
Query: 398 aactaggatcaaggctacagcgtttgatgattggmagcccaatctaaaaagtatatmagt 457
||||| |||| ||||||||||||||||||| | | || |||||| ||||||||||
Sbjct: 41623 aactatgatcgaggctacagcgtttgatgaatcgaagaccaatccaaaaagtatacagcc 41564
Query: 458 mgaaggtttcttcatcctatcttcccctcyggatttgacgacatactaattattgttcta 517
|| |||||||||||| | ||||| | ||||| ||||||| || |||||||||||
Sbjct: 41563 agagtgtttcttcatccagttttcccatttggatt---cgacatattagttattgttcta 41507
Query: 518 cattaagtyatatgtcagatgtmagacaccaaggagaacaccgtaagtcattyacttaat 577
|||| | ||||||||||||| ||| ||||||||||||||||||||| ||| ||||||
Sbjct: 41506 cattggcttatatgtcagatgtaagaaaccaaggagaacaccgtaagtaatttacttaac 41447
Query: 578 tagtcgaagtttgtatgccgagcaccaatttaactatccaattatttca 626
||||||||||| | || |||| ||||||| ||| ||||| ||||||||
Sbjct: 41446 tagtcgaagttcgcataccgattaccaattgaaccatccatttatttca 41398
Score = 106 bits (53), Expect = 8e-23
Identities = 156/195 (80%)
Strand = Plus / Minus
Query: 425 tgattggmagcccaatctaaaaagtatatmagtmgaaggtttcttcatcctatcttcccc 484
||||| | ||||||||| |||||||||| | ||| ||||||| | | ||||||||
Sbjct: 53645 tgattagaagcccaatccaaaaagtatacaggcagaatttttcttcgttcaatcttccca 53586
Query: 485 tcyggatttgacgacatactaattattgttctacattaagtyatatgtcagatgtmagac 544
| |||| ||||||||| |||||||| |||||| |||| | ||||||||||| |||
Sbjct: 53585 tttggatccgacgacatattaattattattctacgttaacttatatgtcagatagaagaa 53526
Query: 545 accaaggagaacaccgtaagtcattyacttaattagtcgaagtttgtatgccgagcacca 604
||||||| ||| ||||||||| ||| |||||| ||||||||||| | || |||| ||||
Sbjct: 53525 accaaggggaataccgtaagtaatttacttaactagtcgaagttcgcataccgattacca 53466
Query: 605 atttaactatccaat 619
||| ||| |||||||
Sbjct: 53465 attgaaccatccaat 53451
>3x_Contig1804
Length = 51183
Score = 134 bits (67), Expect = 3e-31
Identities = 92/99 (92%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 702 ttaacaactacaaatcagaatggcatccagttacatcaatactactaacgctctatgcca 761
||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| | ||
Sbjct: 51181 ttaacaactacaagtcagaatg-catccagttacatcaatactactaaccctctaggtca 51123
Query: 762 agcccctactaccaaacatgatgaatatccagtccaaca 800
||||||||||||||||| ||||||||||||||| |||||
Sbjct: 51122 agcccctactaccaaacttgatgaatatccagtgcaaca 51084
>3x_Contig1802
Length = 45229
Score = 118 bits (59), Expect = 2e-26
Identities = 89/99 (89%)
Strand = Plus / Minus
Query: 702 ttaacaactacaaatcagaatggcatccagttacatcaatactactaacgctctatgcca 761
||||||||||||| ||||||||||||||| |||| | |||||||||||| ||||| ||||
Sbjct: 45189 ttaacaactacaagtcagaatggcatccaattacgttaatactactaaccctctaggcca 45130
Query: 762 agcccctactaccaaacatgatgaatatccagtccaaca 800
|||||||||||||| |||||||||||||||||||||
Sbjct: 45129 agcccctactaccatttttgatgaatatccagtccaaca 45091
Score = 116 bits (58), Expect = 8e-26
Identities = 123/146 (84%), Gaps = 1/146 (0%)
Strand = Plus / Minus
Query: 443 aaaaagtatatmagtmgaaggtttcttcatcctatcttcccctcyggatttgacgacata 502
|||||| |||| || || ||||||||||| | || ||||| | ||| |||||||||||
Sbjct: 36175 aaaaagaatataggtagatggtttcttcattcaat-ttcccattaggaattgacgacata 36117
Query: 503 ctaattattgttctacattaagtyatatgtcagatgtmagacaccaaggagaacaccgta 562
||||||||||||| |||||| | |||||||| |||| ||| ||| ||||||||||||||
Sbjct: 36116 ttaattattgttctgcattaacttatatgtcatatgtaagaaaccgaggagaacaccgta 36057
Query: 563 agtcattyacttaattagtcgaagtt 588
|| ||| ||||||||||||||||||
Sbjct: 36056 agaaattaacttaattagtcgaagtt 36031
Score = 112 bits (56), Expect = 1e-24
Identities = 94/103 (91%), Gaps = 4/103 (3%)
Strand = Plus / Minus
Query: 702 ttaacaactacaaatcagaatgg-cat--ccagttacatcaatactactaacgctctatg 758
||||||||||||||||||||||| ||| |||||||||||||||| ||||| |||||||
Sbjct: 41931 ttaacaactacaaatcagaatggacatacacagttacatcaatactgctaaccctctatg 41872
Query: 759 ccaagcccctac-taccaaacatgatgaatatccagtccaaca 800
||||| |||||| ||| ||||||||||||||||||||||||||
Sbjct: 41871 ccaagtccctacatacaaaacatgatgaatatccagtccaaca 41829
>3x_Contig1670
Length = 9382
Score = 108 bits (54), Expect = 2e-23
Identities = 69/76 (90%)
Strand = Plus / Minus
Query: 446 aagtatatmagtmgaaggtttcttcatcctatcttcccctcyggatttgacgacatacta 505
|||| ||| ||| |||||||||||||||| || ||||| || ||||||||||||||||||
Sbjct: 76 aagtctataagtagaaggtttcttcatccaattttcccatctggatttgacgacatacta 17
Query: 506 attattgttctacatt 521
||||||||||||||||
Sbjct: 16 attattgttctacatt 1
>3x_Contig1547
Length = 9547
Score = 102 bits (51), Expect = 1e-21
Identities = 81/91 (89%)
Strand = Plus / Plus
Query: 710 tacaaatcagaatggcatccagttacatcaatactactaacgctctatgccaagccccta 769
||||| ||| |||| |||||| |||| | |||||||||||| ||||||||||| |||||
Sbjct: 6 tacaattcataatgtcatccaattactttaatactactaaccctctatgccaatacccta 65
Query: 770 ctaccaaacatgatgaatatccagtccaaca 800
||||||||||| |||||||||||||||||||
Sbjct: 66 ctaccaaacattatgaatatccagtccaaca 96
>3x_Contig924
Length = 2007
Score = 102 bits (51), Expect = 1e-21
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 638 atttmtcaatmaatmaatytmaaatatgttctaatacatatttattaataatatgttttt 697
|||| ||||| ||| ||| | ||||||||||||||||||||||||||| |||||||||||
Sbjct: 1263 atttatcaataaataaatttaaaatatgttctaatacatatttattaacaatatgttttt 1322
Query: 698 gactt 702
|||||
Sbjct: 1323 gactt 1327
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8083
Number of Sequences: 1807
Number of extensions: 8083
Number of successful extensions: 119
Number of sequences better than 1.0e-20: 9
length of query: 991
length of database: 10,358,551
effective HSP length: 16
effective length of query: 975
effective length of database: 10,329,639
effective search space: 10071398025
effective search space used: 10071398025
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)